calculate insert size paired end reads
install samtools
samtools sort sample.bam > sort_sample.bam
samtools stats sort_sample.bam | grep "insert size average" > output.txt
more output.txt
[ti_index_build2] fail to create the index file error in vcftools
[ti_index_build2] fail to create the index file for vcf file error in vcftools If you get this error then type 1 )su and type your root password then type 2) tabix -p vcf filename.vcf.gz
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