Exomiser error " Exception in thread "main" java.lang.OutOfMemoryError: Java heap space "
Exomiser error " Exception in thread "main" java.lang.OutOfMemoryError: Java heap space "
full line is " 2017-07-04 02:34:52.617 [main] INFO de.charite.compbio.exomiser.core.factories.VariantFactory - Processed 325375 variant records into 326224 single allele variants, 989 are missing annotations, most likely due to non-numeric chromosome designations
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solution is, u have to increase java heap size like this
before change, it was
-Xms2g -Xmx4g
and now after change
-Xms4g -Xmx10g
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